First I'm not a machinist. I'm a guy who builds his own stuff. Though I've studied with some pretty sharp mentors through out the years. It would be wise to make sure the bearing bores are in the correct range of dimension. I would bet most machine shops have a better dial bore gauge than any of us own. For sure your measurements show the dimension on the crank is on the high side of spec. I'd have your machine shop measure both items. Now the fix? Can the crank be polished and stay round w/o taper? Can the bearing bores be opened enough to make a difference and still be in spec? What if the answers to these questions are no? Two options. Run it as is. Or turn the mains down to -.020" on the low side of the spec. To be honest it looks like a canidate to run thin oil and leave it alone.
Doug
Doug